[Daizu-net V3] Tm value calculation

Daizu-net v3 for functional genomics research of soybean

[Last update: Sep 1st, 2026]

TOP
- V4 (pre-publication preview)
JBrowse2
- Launch JB2
- URLs of Dotplot & Synteny
- 🔗 202 G.max nr-lines (NARO CC) ▶
  - 🧬 Enrei v3.31
  - 🧬 Williams 82 v4 Gmax_508
- 🔗 462 G.max nr-lines (CC, cultivars) ▶
  - 🧬 Enrei v3.31
  - 🧬 Williams 82 v4 Gmax_508
i-TILLING
- 🔗 202 G.max nr-lines (NARO CC) ▶
  - 🧬 Enrei v3.31
  - 🧬 Williams 82 v4 Gmax_508
- 🔗 462 G.max nr-lines (CC, cultivars) ▶
  - 🧬 Enrei v3.31
  - 🧬 Williams 82 v4 Gmax_508
- 🔗 997 Enrei EMS mutants (preview) ▶
  - 🚧🚧🚧 Enrei v3.31
  - 🚧🚧🚧 Williams 82 v4 Gmax_508
RNAseq Atlas
Co-expression
- 🔗 Tissue-wdie 44 RNAseq (Enrei, Wm82)
GO analysis
BLAST
Short DNA mapper
Sequence analysis
- Primer finder
- Clustalw (fasta input)
- ORF finder
- Tm calculation
Download


Tm value calculation for oligo DNA primers
query (input):	! Enter DNA sequence like below. For trial, just click "search" button. CATCATCATTAGGCTTTTGTCACCA AAGTCCATCATCCACAGTTGAA TAGGCCCAAGTCATCTTTCAATT GACTTTTGCGATCCGAGCTTCC GATGCGATCCTTCTTATACTTT TATGGACATTGAAAAAGCTAATACAT AAACTTGAGGAATTTATATCTTCCTC
Method:	GC% nearest neighbor

result will be shown below

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